BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024H01LP1|AL428284
(1046 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1189 1100 0.0
3x_Contig1639 752 0.0
>3x_Contig1189
Length = 5010
Score = 1100 bits (553), Expect = 0.0
Identities = 601/615 (97%), Gaps = 4/615 (0%)
Strand = Plus / Minus
Query: 435 cttggcaaaaggaaacttccggcttccggctaagtgtaacccggccatggccgg-ttacg 493
||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 5009 cttggcaaaaggaaacttccggcttccggctaagtgtaacccg-ccatggccgggttacg 4951
Query: 494 attaatccttttgccaagtacagccaaac-aaaatgggcaggagttaaagatcacgtgcc 552
|||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||
Sbjct: 4950 attaatccttttgccaagtacagcaaaaccaaaatgggcaggagtgaaagatcacgtgcc 4891
Query: 553 tgtkggtcgttacccttccctcccctaacttctcattttcatgctctcaaaa-ggaagaa 611
||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 4890 tgtgggtcgttacccttccctccccgaacttctcattttcatgctctcaaaaaggaagaa 4831
Query: 612 ggaaactgctttttgttagagctcttttccatgtcagttgacagtcgaatttcaggacta 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4830 ggaaactgctttttgttagagctcttttccatgtcagttgacagtcgaatttcaggacta 4771
Query: 672 cagtattttttttttttggccaggaattagttcaacaatacaaattaccttaacaaacaa 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4770 cagtattttttttttttggccaggaattagttcaacaatacaaattaccttaacaaacaa 4711
Query: 732 aagctcaatctatactgccgagagttagaagaagaaaaagcgagtytttaaacattcatt 791
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 4710 aagctcaatctatactgccgagagttagaagaagaaaaagcgagtctttaaacattcatt 4651
Query: 792 gaatcctgtttctccattcttcaacgcctatatatataaccacagtttgaaatgtcagaa 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4650 gaatcctgtttctccattcttcaacgcctatatatataaccacagtttgaaatgtcagaa 4591
Query: 852 gaacaagaacaaaaggtggatgttaagccagaaacacatattaacttgaaggtttcggat 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4590 gaacaagaacaaaaggtggatgttaagccagaaacacatattaacttgaaggtttcggat 4531
Query: 912 ggatccagtgagatcttcttcaagatcaaaaagamcactccattaaaaagattaatggrg 971
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 4530 ggatccagtgagatcttcttcaagatcaaaaagaccactccattaaaaagattaatggag 4471
Query: 972 gcatttgctaagagacaaggtaaagagatttaatccctaagattcctttacgamggtgtg 1031
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 4470 gcatttgctaagagacaaggtaaagagattgaatccctaagattcctttacgacggtgtg 4411
Query: 1032 cgtgtgttaacagat 1046
||||||||| |||||
Sbjct: 4410 cgtgtgttaccagat 4396
>3x_Contig1639
Length = 14140
Score = 752 bits (378), Expect = 0.0
Identities = 391/394 (99%), Gaps = 1/394 (0%)
Strand = Plus / Minus
Query: 1 caatgaaagaatatggtcctgcagtttccatttctcgatggagcttccagtagaggatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 caatgaaagaatatggtcctgcagtttccatttctcgatggagcttccagtagaggatgt 339
Query: 61 agccatcacctgcaagg-cgacaaaatagaaaactgaaactaaaataaaaaggaacgagg 119
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 agccatcacctgcaagggcgacaaaatagaaaactgaaactaaaataaaaaggaacgagg 279
Query: 120 tggaaaacccaaattgggctaagagaaacggtctacggaggttctatttctttttttata 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tggaaaacccaaattgggctaagagaaacggtctacggaggttctatttctttttttata 219
Query: 180 agaaagatagggtaataatctcggtgcttttagtttaatggcacttgagagaacgggttt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 agaaagatagggtaataatctcggtgcttttagtttaatggcacttgagagaacgggttt 159
Query: 240 aaggttccaatatagcccagacagttatagctttatcggaacaaacgaatgagcggtggt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 aaggttccaatatagcccagacagttatagctttatcggaacaaacgaatgagcggtggt 99
Query: 300 gatagcgttcggcgacaaaaatccaatgcaacacggactgaagctctatccaaaaaactg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 gatagcgttcggcgacaaaaatccaatgcaacacggactgaagctctatccaaaaaactg 39
Query: 360 aaaggaaagtgccctcgtgatttatatttacagg 393
||||||||||||||||||||| |||||| |||||
Sbjct: 38 aaaggaaagtgccctcgtgatatatattaacagg 5
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,579
Number of Sequences: 1807
Number of extensions: 15579
Number of successful extensions: 105
Number of sequences better than 1.0e-20: 2
length of query: 1046
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1030
effective length of database: 10,329,639
effective search space: 10639528170
effective search space used: 10639528170
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)